1. Invitatio (invitation to submit an offer, as the seller (see your note) was not allowed to conclude the contract himself.
2. You agree and have communicated this consent via email.
3. Seller sends the draft contract in advance by email.
4. Discusses the contents with you personally and clarifies further questions etc.
5. You all sign.
6. Preparatory documents are sent.
7. In the meantime, you have submitted the construction project to the building authority (before acceptance of your offer by the contractor) and they have confirmed receipt.
8. The contractor modifies your offer and supplements it. This then becomes an offer from him to you again (§ 150 para. 2 Building Code). You could now accept or reject it or change it again and submit another offer.
10. (actually 9.) He explains his reasons once again (actually nicely) and makes it clear that he does not want the contract if he is supposed to create a "real" execution planning.
"Where would we end up ..." You do not have to like the legal provisions. But here they work quite well. You have understood the term "execution planning" differently, so you were not in agreement at all, even if it looks like it in the text. Fortunately, this is noticed beforehand and both sides can reconsider whether they still want to proceed with the contract as is.
I think it is all quite fine, even if the result may not meet your expectations. The months-long negotiations ended, it seems, in a state where all details are included, just not the execution planning as you imagined it.
And again: no contract has been concluded so far. You do not have a final agreement yet. If you now would not accept, then you have negotiated for months in vain, but so has the contractor. That is fair after all, isn’t it?