Record it in writing as a defect and report it to your construction company (if you can't get an expert quickly to take care of it for you). Replacing the wood should not be a problem, just wait and see what the expert and the construction company say. Whether you can withhold part of the amount depends on your contracts. The shell is closed, it’s just about replacing wood worth 20€. A deduction probably isn’t proportionate. The payment plan is already reasonable for a developer project. The property is included in that.